Package: ofpetrial 0.1.3

Taro Mieno

ofpetrial: Design on-Farm Precision Field Agronomic Trials

A comprehensive system for designing and implementing on-farm precision field agronomic trials. You provide field data, tell 'ofpetrial' how to design a trial, and get readily-usable trial design files and a report checks the validity and reliability of the trial design.

Authors:Taro Mieno [aut, cre, cph], Brittani Edge [aut, ctb]

ofpetrial_0.1.3.tar.gz
ofpetrial_0.1.3.zip(r-4.7-any)ofpetrial_0.1.3.zip(r-4.6-any)ofpetrial_0.1.3.zip(r-4.5-any)
ofpetrial_0.1.3.tgz(r-4.6-any)ofpetrial_0.1.3.tgz(r-4.5-any)
ofpetrial_0.1.3.tar.gz(r-4.7-any)ofpetrial_0.1.3.tar.gz(r-4.6-any)
ofpetrial_0.1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ofpetrial/json (API)

# Install 'ofpetrial' in R:

install.packages('ofpetrial', repos = c('https://difm-brain.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/difm-brain/ofpetrial/issues

Pkgdown/docs site:https://difm-brain.github.io

Datasets:

exp_data - Experiment data
plot_info - Plot information
rate_info - Rate information
td_curved - Trial design (single-input) for a curved field
td_single_input - Trial design
td_two_input - Trial design

On CRAN:

4.73 score 3 stars 18 scripts 284 downloads 15 exports 153 dependencies

Last updated from:7727e89458. Checks:7 NOTE, 2 OK. Indexed: yes.

Target	Result	Time
linux-devel	NOTE	203
source / vignettes	OK	249
linux-release	NOTE	193
macos-release	NOTE	156
macos-oldrel	NOTE	258
windows-devel	NOTE	116
windows-release	NOTE	112
windows-oldrel	NOTE	122
wasm-release	OK	152

Exports:%>%add_blocks assign_rates assign_rates_conditional change_rates check_alignment check_ortho_inputs check_ortho_with_chars design_niplorp make_exp_plots make_trial_report prep_plot prep_rate viz write_trial_files

Dependencies:abind backports base64enc bookdown boot broom bslib cachem car carData class classInt cli colorspace colourpicker cols4all commonmark corrplot cowplot cpp11 crosstalk curl data.table DBI Deriv digest doBy dplyr e1071 evaluate farver fastmap fontawesome forecast Formula fracdiff fs generics geojsonsf geometries ggExtra ggplot2 ggpubr ggrepel ggsci ggsignif glue gridExtra gtable highr htmltools htmlwidgets httpuv isoband jquerylib jsonify jsonlite KernSmooth knitr labeling later lattice lazyeval leafem leafgl leaflegend leaflet leaflet.providers leafsync lifecycle lme4 lmtest logger lwgeom magrittr maptiles MASS Matrix MatrixModels memoise mgcv mime miniUI minqa modelr nlme nloptr nnet numDeriv otel pbkrtest pillar pkgconfig png polynom promises proxy purrr quantreg R6 rapidjsonr rappdirs raster rbibutils RColorBrewer Rcpp RcppArmadillo RcppEigen Rdpack reformulas rlang rmarkdown rstatix s2 S7 sass scales servr sf sfheaders shiny shinyjs sourcetools sp spacesXYZ SparseM stars stringdist stringi stringr survival terra tibble tidyr tidyselect timeDate tinytex tmap tmaptools units urca utf8 vctrs viridisLite withr wk xfun XML xtable yaml yyjsonr zip zoo

Basic Workflow

Rendered frombasic-work-flow.Rmdusingknitr::rmarkdown

Last update: 2024-05-13
Started: 2024-05-07

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Add blocks to trial design	add_blocks
Assign rates to the plots of experimental plots	assign_rates
Assign rates to the plots of experimental plots for a single input based on existing trial designs created by assign_rates()	assign_rates_conditional
Change the assigned rates	change_rates
Check the alignment of harvester and applicator/planter	check_alignment
Check the correlation of the two inputs	check_ortho_inputs
Check the orthogonality with field/topographic characteristics	check_ortho_with_chars
Design a Nitrogen-induced Profit Loss Recovery Program (NIPLORP) experiment	design_niplorp
Experiment data	exp_data
Make experimental plots/strips inside the field boundary	make_exp_plots
Create trial design report	make_trial_report
Plot information	plot_info
Prepare plot information for a single-input experiment (length in meter)	prep_plot
Create data of input rate information for a single input	prep_rate
Rate information	rate_info
Trial design (single-input) for a curved field	td_curved
Trial design (single-input)	td_single_input
Trial design (two-input)	td_two_input
Visualize various aspects of a trial design	viz
Write trial design files for field implementation	write_trial_files